Spov3_chr4.02155 (ATCNGC17, CNGC17)

Aliases : ATCNGC17, CNGC17

Description : cyclic nucleotide-gated cation channel *(CNGC)

Gene families : OG0001776 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001776_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.02155
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_103

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005992	trehalose biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006073	obsolete cellular glucan metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	528	615
IPR005821	Ion_trans_dom	105	432

External Links

No external refs found!

Spov3_chr4.02155 (ATCNGC17, CNGC17)

Expression Profile

Co-expression Networks

Functional Annotation