Spov3_chr4.02151 (UBP18)

Aliases : UBP18

Description : deubiquitinase *(UBP15-21)

Gene families : OG0008448 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.02151
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	166	469
IPR002893	Znf_MYND	75	112

External Links

No external refs found!

Spov3_chr4.02151 (UBP18)

Expression Profile

Co-expression Networks

Functional Annotation