1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr4.01869

Spov3_chr4.01869 (RFA5)


Aliases : RFA5

Description : not classified


Gene families : OG0000401 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01869
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_932

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.04258 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04591 NFA3, NAP1;3, NFA03 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00088 DMS4, RDM4 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02375 MEE56 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02379 SDHAF4 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01775 WRKY27, ATWRKY27 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02634 RFA5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 246 346
IPR008906 HATC_C_dom 392 472
No external refs found!