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  5. Spov3_chr4.01868

Spov3_chr4.01868


Description : not classified


Gene families : OG0000099 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01868
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0011.00051 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0017.00004 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02797 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02668 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04088 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01560 mtE2-1, LTA3 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00617 MYB58, ATMYB58 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00707 CHR8 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02816 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02485 BRF2 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025558 DUF4283 125 200
No external refs found!