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  5. Spov3_chr4.01757

Spov3_chr4.01757


Description : not classified


Gene families : OG0000704 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01757

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0010.00096 AtMAD1, NES1, MAD1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0030.00042 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04514 AtMAD1, NES1, MAD1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00036 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009143 nucleoside triphosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901292 nucleoside phosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 376 479
IPR008906 HATC_C_dom 529 613
No external refs found!