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  5. Spov3_chr4.01596

Spov3_chr4.01596 (SIRK, FRK1)


Aliases : SIRK, FRK1

Description : deubiquitinase *(ZUP)


Gene families : OG0000015 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01596
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_413

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0018.00040 ASIL1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0329.00001 NAP, ATNAP, ANAC029 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00618 ASIL1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01992 ASIL1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03813 ASIL1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03821 FH19, AtFH19 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04496 RPG1, SWEET8, AtSWEET8 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03937 ATEGY2, EGY2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03992 IAA20 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02191 NAP, ATNAP, ANAC029 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02341 IAA20 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012462 UfSP1/2_DUB_cat 26 142
No external refs found!