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  5. Spov3_chr4.01166

Spov3_chr4.01166 (CEV1, IXR1, ELI1,...)


Aliases : CEV1, IXR1, ELI1, ATH-B, CESA3, MRE1, ATCESA3

Description : not classified


Gene families : OG0001072 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01166
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.03325 UVR1, UVH3 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02141 MYB118, ATMYB118, PGA37 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03109 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 186 265
IPR000477 RT_dom 20 117
No external refs found!