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  5. Spov3_chr4.01127

Spov3_chr4.01127 (CHI, AtCHI, A11, TT5, CFI)


Aliases : CHI, AtCHI, A11, TT5, CFI

Description : EC_5.5 intramolecular lyase. chalcone isomerase


Gene families : OG0002138 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01127
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Bra003209 CHI, AtCHI, A11, TT5, CFI EC_5.5 intramolecular lyase. chalcone isomerase 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra007142 CHI, AtCHI, A11, TT5, CFI EC_5.5 intramolecular lyase. chalcone isomerase 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra039362 CHI, AtCHI, A11, TT5, CFI not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 12 214
No external refs found!