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Description : component *(eL41) of large ribosomal-subunit (LSU) proteome
Gene families : OG0001897 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001897_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr4.00696 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra000178 | SAN5, ISI3,... | component *(eL41) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003883 | CTP synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |