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  5. Spov3_chr4.00431

Spov3_chr4.00431 (REM16)


Aliases : REM16

Description : not classified


Gene families : OG0000082 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00431
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.01596 REM16 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01504 DRN-LIKE, DRNL,... not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04358 REM16 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 1744 1863
IPR005162 Retrotrans_gag_dom 37 121
IPR000467 G_patch_dom 1325 1366
No external refs found!