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  5. Spov3_chr4.00350

Spov3_chr4.00350 (WES1, GH3.5)


Aliases : WES1, GH3.5

Description : not classified


Gene families : OG0000001 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00350
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0003.00140 MCTP7 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0038.00017 PrimPol not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00069 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01914 ZRF1a, AtGlsA1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02918 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00175 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03195 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02957 AGL34 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03193 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03194 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03197 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003964 RNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 181 274
No external refs found!