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  5. Spov3_chr4.00308

Spov3_chr4.00308 (XTH16)


Aliases : XTH16

Description : EC_2.4 glycosyltransferase


Gene families : OG0001220 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00308
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr4.00307 XTR6, XTH23 EC_2.4 glycosyltransferase 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00313 XTH16 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0006073 obsolete cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010713 XET_C 265 308
IPR000757 GH16 37 220
No external refs found!