Spov3_chr3.04591 (ABCG8)

Aliases : ABCG8

Description : not classified

Gene families : OG0004474 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004474_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.04591
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_8

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra022614	ABCG8	subfamily ABCG transporter	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	240	306
IPR013525	ABC2_TM	372	453
IPR003439	ABC_transporter-like_ATP-bd	65	210

External Links

No external refs found!

Spov3_chr3.04591 (ABCG8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation