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  5. Spov3_chr3.03372

Spov3_chr3.03372 (ATB' GAMMA)


Aliases : ATB' GAMMA

Description : not classified


Gene families : OG0000522 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.03372
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.04486 PMR6 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04524 BTL12, CIP8 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00103 SWI3C, CHB4, ATSWI3C not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03373 RPA70B, RPA1B, ATRPA70B not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046855 obsolete inositol phosphate dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 93 175
IPR025525 hAT-like_transposase_RNase-H 3 47
No external refs found!