Heatmap: Cluster_495 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.42 -2.42 -1.75 -1.62 0.06 -0.17 -0.8 -0.67 -0.24 -0.12 -0.32 -0.64 0.31 0.65 0.85 -0.16 -0.03 0.93 -0.18 -1.21 -0.95 0.17 1.98 0.44 0.11 -0.32 -0.43 0.13 0.43 0.01 -0.08
Bra031907 (MNU1)
-3.27 -4.49 -1.89 -3.24 -0.97 -0.78 -1.69 -0.24 -0.42 -0.34 -0.34 -0.15 -0.88 0.48 1.05 0.72 -0.93 0.61 0.24 -0.85 -0.66 -1.25 2.21 0.05 0.38 0.5 0.39 -0.24 0.48 -0.22 0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.