Heatmap: Cluster_426 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra008788 (NAC084)
-0.34 -0.59 0.13 -0.56 -0.32 -2.54 -1.06 -0.4 0.11 -1.17 -0.52 0.57 0.36 - -2.27 -0.1 -2.16 -0.37 -1.82 -0.28 -0.46 -1.75 2.96 -1.28 0.44 -0.06 -0.12 -0.03 -0.1 1.12 -0.36
Bra020197 (WRKY38)
- - - -4.18 - - - -4.59 -4.74 -3.65 - -4.55 -4.34 - - -1.74 -4.37 -1.04 - - - -1.26 4.29 -1.0 -0.27 -1.7 -0.69 -0.88 0.39 2.53 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.