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Heatmap: Cluster_740 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021346 (NET1A)
 - - 1.53 0.95 0.6 1.1 - 0.52 1.96 - - -0.59 - 1.85 2.27 1.3 - - - -0.38 - 0.38 - - 1.09 - 0.51 - - - -
Bra036378 (bZIP58)
 0.84 - 1.13 - -0.14 - - 0.37 1.4 - 0.38 - - 1.56 2.08 1.45 1.06 -1.16 -0.94 - - -0.23 -1.01 0.91 - -0.11 - 0.15 0.1 - 0.65
Bra040993 (MPL1)
 - - 1.94 - - - - - 1.82 - - - - 1.54 1.08 -0.11 - - - 0.66 0.52 - - 1.95 - - 2.04 1.6 -0.24 - 1.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.