Heatmap: Cluster_894 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017489 (HAT2)
1.2 0.0 0.52 1.39 0.93 0.36 -1.15 -0.46 0.04 -0.64 -0.41 -1.21 -0.28 0.49 0.98 -0.98 -0.47 0.31 -1.4 -1.28 -0.55 -2.06 -0.1 -0.11 -0.95 -1.04 -0.53 -0.32 -0.34 0.37 0.68
Bra031623 (DCP1)
0.72 -0.5 0.46 1.53 0.56 0.24 -0.99 -1.12 0.04 -0.31 -0.25 -0.43 -0.54 0.54 0.87 -0.26 -0.43 0.01 0.16 -0.24 -0.42 -0.28 0.5 -0.28 -0.4 -0.74 -0.62 -0.45 -0.3 -0.54 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.