Heatmap: Cluster_868 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013188 (DFA)
- - - -0.95 -0.81 -1.95 0.11 0.37 -0.52 -0.63 0.84 1.07 -0.05 1.58 1.18 -0.37 - 0.32 0.44 0.44 0.41 0.67 0.56 -0.81 -1.14 -1.3 -0.01 0.07 0.11 0.36 -0.22
Bra031008 (BW52)
- - - - -0.87 -2.0 0.16 -0.03 0.71 - 0.65 1.18 1.05 1.69 0.86 -0.14 -0.86 1.37 1.3 -0.27 - -0.93 1.79 -0.36 -1.9 - -1.78 -0.18 - 0.13 -0.18
Bra036735 (TBL25)
- - - -0.79 -1.75 -1.22 0.47 0.19 0.12 0.04 0.34 -0.37 -0.03 1.72 1.53 -2.25 - 0.21 -0.03 0.36 -0.26 0.13 0.47 0.27 0.42 -1.24 0.42 0.07 0.31 0.13 0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.