Heatmap: Cluster_739 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.44 -0.21 -0.01 -0.37 1.73 2.06 -1.74 -1.5 -1.4 -4.76 -1.71 -0.51 -0.17 1.7 0.95 -0.34 -1.25 -0.48 -1.12 -0.79 0.08 -1.07 0.94 -0.53 -1.28 0.36 -2.59 -0.82 -0.67 -0.07 -2.11
0.39 -0.8 0.98 -0.22 1.67 2.35 - - - -2.75 -1.22 0.29 - 2.25 1.37 -1.47 0.01 0.66 0.24 -0.69 -0.38 -2.73 0.28 - - -1.17 - -1.49 -0.24 -2.68 -2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.