Heatmap: Cluster_494 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.18 -0.02 -0.12 0.02 -0.06 0.35 0.07 -0.04 -1.05 -0.27 -0.75 -0.61 -0.71 0.03 0.1 0.21 -0.18 -0.79 0.15 0.46 0.3 -0.06 -0.25 0.38 0.37 0.18 0.44 0.06 0.06 -0.19 0.29
Bra030169 (RKFL2)
-0.63 0.18 -0.18 -0.07 0.24 0.31 0.37 -0.13 -0.53 -0.79 -1.24 -1.8 -0.44 -0.3 0.46 0.42 0.15 -1.09 -0.05 0.26 -0.73 -0.04 -0.05 0.49 0.58 0.33 0.44 0.36 0.21 0.27 0.12
Bra030170 (RKFL3)
-0.6 0.56 0.28 0.12 0.46 0.38 0.67 0.1 -0.13 -0.91 -0.73 -0.42 -0.46 0.25 0.89 0.52 0.57 -1.17 0.05 0.89 -0.33 0.27 -0.89 -0.26 -0.1 -0.48 -0.18 -0.46 -0.4 -0.88 -1.05
Bra030174 (RKFL3)
0.49 0.15 0.05 -0.04 0.67 0.58 0.39 -0.13 -0.05 -0.62 -0.89 -0.84 -0.53 -0.17 0.19 0.47 0.31 -0.98 0.23 0.51 -0.3 0.48 -0.64 0.07 -0.04 -0.15 -0.1 -0.33 -0.21 -0.32 -0.24
Bra031886 (MAF2)
-0.02 0.1 -0.23 -0.51 0.42 0.73 -0.09 -0.17 -0.63 -0.84 -0.59 -1.36 -0.88 -0.34 0.29 -0.86 -0.18 -0.54 -0.88 -0.16 -0.71 -1.51 0.26 0.57 1.08 0.59 0.99 0.51 0.21 0.13 0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.