Heatmap: Cluster_870 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.51 -1.64 -0.62 -2.05 0.47 0.24 -1.01 -0.83 -0.11 -0.4 0.53 -0.05 0.28 0.93 0.75 0.05 0.06 0.36 0.36 0.16 0.18 0.15 -0.83 0.24 0.12 -0.36 0.11 0.02 0.15 -0.13 0.26
Bra017774 (CNGC16)
-1.23 -1.59 0.94 -1.58 0.25 0.56 -0.34 -0.61 -0.23 -0.54 0.3 -0.82 0.18 1.08 0.93 -0.05 -0.33 0.58 0.09 0.32 -0.16 0.41 0.54 -0.33 -0.89 -1.29 -0.5 -0.83 -0.06 0.07 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.