Heatmap: Cluster_579 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.43 -1.75 -2.11 -1.26 0.08 0.76 0.48 -0.14 -0.07 -0.1 -0.89 -0.15 0.09 -0.11 -0.29 -0.19 -0.34 0.31 -0.19 0.07 -0.07 0.06 2.92 -0.85 -0.82 -1.46 -0.95 -0.94 -0.57 -0.91 -0.9
Bra021681 (NIT2)
-1.99 -4.63 -3.87 -1.63 -0.88 0.57 -0.26 -0.96 -0.55 -0.71 -1.17 -0.81 -0.24 0.47 -0.05 -0.36 -0.34 0.77 0.08 0.39 -0.76 0.12 3.07 -0.22 -0.12 -1.08 -0.21 -0.61 -0.24 -1.2 -0.63

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.