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Heatmap: Cluster_463 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000380 (SAG201)
 - - - -1.77 1.31 -0.79 -3.06 - 0.48 -0.35 1.09 -0.14 -0.68 0.68 0.49 0.91 0.64 1.43 0.55 0.62 1.5 0.63 -3.8 -0.42 0.23 -1.83 -0.35 0.37 -2.7 -0.74 -3.67
Bra023519 (GAUT14)
 -0.41 -0.78 -0.45 -0.43 0.61 -0.4 -0.61 -0.62 0.23 0.42 0.45 -0.02 -0.4 0.27 0.07 0.53 -0.39 0.92 0.26 -0.02 -0.13 -0.03 -1.48 -0.32 -0.05 -0.11 0.44 0.1 0.05 0.05 0.02
-0.28 -1.18 -0.19 -1.44 0.34 0.14 -0.75 -0.24 0.03 0.29 0.84 0.08 0.33 0.24 0.19 0.7 0.15 0.71 0.44 0.75 0.38 -0.05 0.49 -1.03 -0.37 -1.26 -0.61 -0.16 -0.91 -0.88 -0.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.