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Heatmap: Cluster_622 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006485 (BUD2)
 -0.87 -0.9 -0.32 0.76 -0.34 -0.26 -0.07 0.35 0.39 -0.17 -0.46 -0.66 0.72 0.07 1.2 -0.28 -0.12 0.23 -0.86 -0.37 -0.21 -0.48 -2.27 0.9 -0.45 0.13 -0.31 -0.14 -0.09 -0.17 0.82
0.19 -0.77 -0.53 0.77 0.43 -0.07 0.61 1.15 -0.4 0.11 -0.03 -2.99 1.31 -0.61 0.89 0.31 -0.63 -1.55 -1.64 -1.39 -1.45 -1.59 -0.22 0.12 -1.16 1.72 -1.97 -1.32 -0.64 -0.66 0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.