Heatmap: Cluster_526 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002053 (HMG2)
0.88 1.26 -0.5 -0.17 0.8 0.0 0.65 0.11 -0.32 -0.8 -1.25 -0.57 1.38 -0.74 0.62 1.02 0.16 0.97 -0.11 -0.2 -1.54 -0.14 0.87 -2.14 -1.61 -3.65 -1.77 -2.48 -2.01 -0.72 -0.62
0.61 0.87 -0.87 -0.67 -0.91 -0.18 1.17 1.11 -1.32 -0.69 -1.15 -1.1 0.9 0.16 0.73 0.66 0.77 0.6 -0.6 0.08 -0.01 -0.32 1.24 -1.17 -1.06 -1.24 -1.08 -1.76 -1.85 -1.97 -0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.