Heatmap: Cluster_422 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.43 -2.19 -0.72 - 1.12 1.97 -5.04 - 0.08 -1.49 0.11 -1.44 1.27 2.45 1.31 -3.06 - 1.87 1.2 -0.83 -0.76 -2.18 0.23 -2.37 -1.86 -1.5 -2.86 -3.55 -4.65 -3.16 -1.87
Bra020074 (MED31)
0.32 -0.57 -0.42 -1.41 0.72 1.07 -0.86 -1.08 -0.54 -1.03 -0.4 -0.5 -0.32 1.51 1.06 0.2 -0.24 0.91 0.98 0.11 -0.54 -0.56 0.23 -0.37 -0.76 -1.06 -0.44 -0.7 -0.12 -0.92 -0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.