Heatmap: Cluster_849 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.65 -0.7 -1.5 -1.41 -0.16 0.78 -0.34 -1.38 0.23 -0.15 0.46 -0.22 -0.71 0.36 1.19 0.66 0.43 -3.69 0.18 0.61 0.27 0.21 -2.28 0.44 0.17 0.26 0.0 0.6 0.15 -0.38 -1.24
Bra007596 (BEST)
-0.2 -0.58 -2.15 -1.1 -0.34 0.4 -0.07 -0.73 0.3 -0.23 0.16 -0.17 -0.26 0.58 1.17 0.18 0.05 -0.73 0.28 0.04 -0.05 -0.39 -0.96 0.37 0.28 -0.2 -0.01 0.52 0.47 -0.01 -0.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.