Heatmap: Cluster_935 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017103 (AtANN4)
- -0.79 - - -1.1 -1.25 1.14 - 0.28 0.34 - 0.31 -1.07 - - -0.99 - 2.02 -0.34 1.12 1.12 2.03 - - - 0.35 0.72 - -0.1 1.85 0.9
Bra032102 (STYK)
- -1.38 -0.5 -2.41 0.3 -0.89 -0.28 -0.44 -0.27 -0.01 0.45 0.08 0.6 0.36 1.41 -2.2 -0.39 1.15 -2.11 0.98 0.38 1.03 -0.89 -0.35 -1.44 -0.23 -0.03 -0.17 -0.08 -0.14 0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.