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Heatmap: Cluster_382 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.29 0.36 0.38 -0.0 1.2 0.72 -0.51 -1.27 0.17 -0.13 -0.07 -0.11 -0.47 0.76 0.2 -0.4 -0.55 0.21 -0.17 -0.02 -0.4 -0.02 0.87 -0.75 -0.65 -0.85 -0.57 -0.36 -0.22 -0.25 -0.55
Bra026723 (MTP10)
 0.63 0.56 0.37 -0.61 1.13 0.78 -0.11 -0.75 -0.33 -0.08 -0.3 -0.41 -0.2 0.1 0.52 0.14 -0.25 -0.18 -0.22 -0.18 -0.18 -0.14 0.82 -0.66 -0.4 -0.94 -0.65 -0.28 -0.11 -0.35 -0.48
0.77 0.16 0.18 -0.72 1.38 0.65 -0.69 -1.18 0.18 -0.16 0.14 -0.22 -1.18 0.47 0.56 -0.22 -0.55 -0.34 -0.45 -0.73 -0.16 -0.29 1.01 -0.31 -0.16 -0.35 -0.53 -0.03 0.11 -0.38 -0.98

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.