Heatmap: Cluster_723 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra007490 (GDI2)
1.93 - -0.01 0.99 1.58 1.85 -1.71 - 0.81 -1.52 - 0.66 -1.24 0.39 0.94 1.1 - 1.72 -1.69 -1.38 -0.41 - -1.47 - -1.48 0.15 - 0.35 - - -
Bra012236 (SMD3B)
2.33 -0.91 0.79 0.93 1.84 1.38 -1.64 -0.64 0.78 - - 0.09 -0.57 -1.44 -1.07 - - - - - - - - 0.59 -1.38 -0.02 -1.48 0.69 -0.23 -0.26 1.93

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.