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Heatmap: Cluster_620 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra007800 (AtECA4)
 0.04 0.48 0.78 0.31 0.07 0.71 0.06 0.06 0.37 -0.65 -0.35 -0.39 1.18 1.35 0.85 0.14 -0.65 0.75 -0.46 0.19 -0.28 -0.17 -1.58 -1.36 -1.42 -0.42 -1.58 -1.44 -1.26 -1.36 -1.39
Bra010114 (TUB2)
 0.27 0.35 0.46 0.27 0.17 0.28 0.04 0.02 0.35 -0.2 -0.14 0.09 0.35 0.54 0.35 0.21 -0.3 -0.01 0.08 -0.13 0.21 0.0 -1.15 -0.54 -0.59 -0.89 -0.57 -0.34 -0.28 -0.33 -0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.