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Heatmap: Cluster_686 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra016116 (CPB)
 0.43 0.58 0.7 0.45 0.47 0.36 0.17 -0.23 -0.04 0.15 -0.01 0.08 -0.13 0.09 0.02 0.08 -0.37 -0.48 -0.34 0.19 -0.18 0.1 -0.64 -0.54 -0.31 -0.58 -0.5 -0.3 -0.14 -0.36 -0.09
Bra037479 (HINT3)
 0.5 0.77 0.59 0.72 0.18 0.2 0.13 -0.24 0.03 0.07 -0.08 -0.09 -0.39 0.15 0.17 -0.11 -0.06 -0.67 -0.61 0.07 -0.03 -0.05 -1.1 -0.44 -0.31 0.13 -0.22 -0.23 0.03 -0.42 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.