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Heatmap: Cluster_713 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.83 -1.01 -1.33 -0.55 -1.03 -0.99 0.57 1.73 -1.34 -0.85 -1.45 -0.77 0.72 -1.08 0.56 0.55 0.4 0.62 -0.19 0.02 -0.21 0.16 2.04 -0.07 -0.26 -0.38 -0.53 -1.33 -1.53 -1.33 0.23
-0.72 -0.41 -0.67 -0.5 -0.1 -0.04 0.4 1.56 -1.86 -0.98 -1.06 -1.12 0.74 0.24 0.63 0.05 0.37 0.59 -1.18 0.06 -0.6 0.06 1.85 -0.54 -0.86 -0.46 -0.81 -0.3 -1.76 -1.51 0.49
-2.32 -1.12 -2.0 -1.2 -1.26 -0.48 0.41 2.06 -2.42 -2.89 -3.14 -1.93 1.19 -0.7 0.59 0.87 1.1 0.66 -2.09 -1.21 -1.62 -0.59 2.28 -0.32 -0.58 -2.61 -0.69 -1.26 -0.08 -1.08 0.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.