Heatmap: Cluster_608 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra007583 (MBD8)
-5.4 - - -4.43 - -0.99 -0.96 -2.76 -0.66 -0.65 -0.37 0.36 -3.33 0.1 -1.46 -0.86 -0.45 -2.1 1.05 -0.94 -1.44 -1.39 -2.09 1.15 1.68 1.49 1.32 1.05 1.45 1.1 1.09
Bra021780 (GLR5)
0.33 - - -1.77 - -2.81 -2.41 -3.94 -3.99 -1.0 -0.93 -3.93 -3.62 0.33 1.5 - - - 0.07 - -1.77 -3.96 0.46 1.2 1.01 2.14 1.4 -0.55 2.14 0.67 1.53
- - - - -3.34 - -2.58 -2.01 -0.52 - -3.53 -3.06 -0.36 0.16 1.33 -2.2 -0.24 -0.45 1.05 -2.33 -1.05 - -1.05 0.97 0.83 1.81 0.77 0.93 2.18 0.47 1.75
- -2.38 - -1.33 -1.5 0.47 -1.67 - - -2.43 -1.55 - - 0.33 1.75 -2.31 - -2.51 -0.55 -2.38 0.36 -1.56 1.05 0.26 1.19 1.65 1.01 0.89 1.76 1.09 1.18
- - - - - - - - - - - -1.27 - - -0.69 - - - - - - - 1.43 2.09 -0.14 2.53 1.19 1.72 1.61 1.29 2.38
-1.43 -2.8 -3.77 -3.31 -1.27 -1.19 -1.76 -0.68 0.33 -1.44 -0.4 -1.11 -1.3 -0.83 -0.37 0.17 -0.35 -0.94 1.31 -0.27 -0.87 -1.66 0.53 0.87 0.94 0.99 0.96 1.18 1.4 0.66 0.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.