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Heatmap: Cluster_750 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.33 0.33 -0.32 -0.64 1.2 0.76 -0.42 -0.22 -0.46 -0.55 -0.29 -0.39 -0.53 0.68 0.52 -0.18 -0.5 0.21 0.09 -0.51 -0.53 -0.34 0.11 -0.31 -0.04 -0.38 -0.29 0.18 0.13 -0.09 0.15
0.23 0.09 -0.12 -0.07 0.82 0.5 -0.16 -0.03 -0.29 -0.15 -0.13 -0.37 -0.06 0.63 0.66 0.08 -0.1 0.08 -0.08 -0.17 -0.44 -0.32 0.27 -0.27 -0.33 -0.44 -0.36 -0.11 -0.11 -0.38 -0.06
Bra035338 (RPT4A)
 -0.03 0.36 0.05 -0.42 0.82 0.49 -0.23 -0.33 -0.22 -0.06 -0.19 -0.44 0.01 0.37 0.28 0.12 -0.3 0.17 -0.12 -0.17 -0.25 -0.08 0.06 -0.04 -0.1 -0.21 -0.11 0.17 0.0 -0.29 -0.15
Bra035984 (MNS4)
 0.3 0.32 0.17 -0.37 0.61 0.6 -0.28 -0.62 -0.04 -0.14 -0.17 -0.32 -0.17 0.46 0.36 0.01 -0.28 -0.33 0.03 0.2 -0.17 -0.02 0.07 -0.0 -0.17 -0.26 -0.1 -0.08 0.08 -0.33 -0.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.