Heatmap: Cluster_295 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra004637 (MIZ1)
-2.44 - -1.44 -0.82 -1.41 -1.02 -0.37 -0.56 -1.39 -0.7 0.38 -0.81 0.07 -0.64 0.76 0.91 0.01 2.12 0.29 -1.41 -0.22 -0.22 0.76 -0.28 0.56 0.58 0.05 -1.19 0.09 -0.71 1.09
Bra027776 (MIZ1)
-2.44 - -1.44 -0.82 -1.41 -1.02 -0.37 -0.56 -1.39 -0.7 0.38 -0.81 0.07 -0.64 0.76 0.91 0.01 2.12 0.29 -1.41 -0.22 -0.22 0.76 -0.28 0.56 0.58 0.05 -1.19 0.09 -0.71 1.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.