Heatmap: Cluster_647 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra019952 (GRP23)
-0.36 -4.17 -2.69 -1.34 -0.13 0.98 -0.02 -0.16 -1.91 0.01 -0.35 -0.6 0.9 1.02 1.43 0.85 1.25 1.69 0.33 0.03 -0.01 0.59 0.55 -2.73 - -1.03 -1.63 -1.72 -2.43 -3.41 -1.6
-1.77 -2.97 -0.62 -0.1 -0.57 0.53 -0.31 0.28 -0.61 0.39 0.59 0.41 1.1 0.36 0.84 0.72 1.14 1.41 0.19 -0.16 -0.37 0.66 0.0 -2.05 -1.33 -0.85 -1.99 -1.11 -1.83 -1.54 -1.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.