Heatmap: Cluster_398 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra027761 (RGLG2)
2.15 2.09 2.38 1.82 0.76 0.11 -1.45 -1.34 -2.5 -0.44 -0.21 -1.41 -1.37 0.64 -3.15 -1.06 -3.83 -1.48 -0.63 -0.45 -0.87 -0.97 -1.47 -2.59 -2.75 -2.01 -1.77 -1.42 -1.3 -1.85 -2.28
Bra040921 (DRM1)
1.6 1.58 1.84 1.64 1.18 1.29 -0.46 -1.5 -2.39 -1.01 0.29 -0.7 -1.61 0.7 -0.12 -0.93 -0.68 -0.66 -0.17 -0.88 -0.78 -2.97 -1.29 -1.49 -1.09 -1.75 -1.97 -1.53 -1.42 -1.67 -1.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.