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Heatmap: Cluster_550 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002976 (ORRM2)
 -0.11 0.06 -0.47 0.07 -0.02 0.28 -0.24 -0.46 -0.94 -0.46 -0.57 -0.3 -0.19 -0.23 0.58 -0.07 0.19 0.19 -0.19 0.44 0.51 -0.19 0.7 0.14 0.06 -0.05 -0.01 -0.09 -0.34 0.08 0.31
Bra002977 (ORRM2)
 -0.06 -0.11 0.16 0.01 -0.24 0.1 -0.57 -0.88 -0.92 -0.54 -0.46 -0.89 -0.65 0.02 0.72 0.17 -0.05 0.37 0.02 0.54 0.29 -0.1 0.77 0.2 0.21 0.01 -0.06 0.04 -0.22 -0.13 0.34
Bra004010 (MGP3)
 -0.25 0.49 0.02 0.11 0.31 -0.18 0.84 -0.03 -0.87 -1.12 -0.74 -0.9 0.08 -1.82 0.94 -0.18 -0.47 0.17 -0.51 -0.53 -0.09 -0.75 0.92 0.36 0.04 -0.1 0.17 -0.28 -0.57 -0.01 0.99

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.