Heatmap: Cluster_353 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra022463 (NBP35)
-0.64 -0.6 -2.75 -1.12 -4.17 -0.29 -0.95 0.67 -0.2 -0.99 -1.48 -0.11 -1.56 -0.2 -1.16 -0.09 -0.08 2.26 1.41 -0.26 -1.44 -1.24 0.11 0.12 0.16 0.03 0.11 0.0 0.06 0.64 0.88
Bra025678 (MYB47)
-0.97 -2.05 -4.01 -2.23 -4.41 -0.77 -0.54 -0.23 0.58 -0.29 -0.53 0.5 -0.04 -1.43 -1.11 0.07 -0.12 2.49 0.99 -0.66 -0.16 -0.52 -2.54 -0.29 -0.41 -0.49 -0.06 -1.02 0.05 0.64 1.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.