Heatmap: Cluster_527 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.81 -1.17 0.21 -0.38 -1.24 0.31 0.27 0.18 0.25 0.18 0.25 0.07 0.31 0.08 -0.06 0.04 -1.06 -0.64 -0.51 0.46 0.59 0.76 0.19 -0.42 -0.38 0.05 -0.34 -0.5 0.66 0.22 0.22
-1.23 -0.18 0.1 -0.96 -3.88 -0.01 -0.36 -0.22 0.21 -0.15 0.02 0.57 -1.09 -1.06 -0.02 -0.25 0.02 -0.98 -0.3 0.47 0.98 0.57 0.23 0.1 0.38 -0.09 0.3 0.51 0.55 -0.1 0.43
0.08 0.28 -0.22 -0.16 -0.33 0.32 -0.14 -0.24 -0.37 0.06 0.03 0.07 -0.17 0.14 0.1 0.14 -0.1 -0.89 -0.41 -0.14 0.29 -0.05 0.2 0.3 0.27 0.09 0.05 -0.29 0.19 -0.14 0.35
-2.12 -1.12 -1.72 -1.25 0.16 0.34 -0.12 -0.64 -0.69 -0.92 0.1 0.75 0.44 0.64 0.91 0.77 0.21 -0.19 -0.36 0.42 -0.09 0.94 -0.06 -0.52 -0.44 0.06 0.02 -0.05 -0.09 -0.11 -0.1
Bra027672 (ISPF)
-0.48 -1.03 -1.22 -0.3 -0.77 0.01 -0.24 -0.78 0.69 0.15 0.63 0.35 0.23 0.24 0.53 0.23 -0.69 -0.65 0.0 0.19 -0.17 0.63 -0.83 -0.01 -0.12 -0.13 -0.02 0.16 0.43 0.1 0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.