Heatmap: Cluster_772 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013900 (LAF1)
0.16 -1.22 1.03 -0.67 1.14 0.7 -0.33 -0.9 0.99 -0.24 -1.3 0.43 -1.19 0.63 1.82 -2.07 -3.26 -0.41 -0.04 -0.99 -0.43 -0.27 1.83 -3.96 -1.92 -0.01 -1.19 -2.88 -1.15 -0.94 -0.06
Bra024718 (AtBBE4)
0.51 -1.1 0.85 -0.11 0.8 0.03 -0.93 -1.92 0.98 -0.07 -1.16 0.95 -2.03 0.74 1.94 -1.28 -1.72 -1.22 0.57 -0.97 -0.58 0.36 1.89 -1.45 -1.41 -1.82 -1.18 -1.27 -1.21 -1.27 -2.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.