- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 268 uE m-2 s-1 | Light: 202.5 uE m-2 s-1 (Control) | Light: 135 uE m-2 s-1 | Light: 67.5 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L20D4 (Control) | Photoperiod: L12D12 | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C | Temperature: 25°C (Control) | Temperature: 30°C | Temperature: 35°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Bra001046 (SAMDC) | -0.17 | -0.0 | -0.52 | -0.49 | -0.26 | 0.44 | -0.25 | -0.42 | -0.68 | -0.61 | -0.32 | -0.25 | 0.04 | 0.21 | 0.49 | 0.23 | 0.19 | -0.37 | 0.21 | 0.24 | 0.35 | -0.23 | 0.74 | 0.27 | 0.29 | 0.63 | 0.16 | -0.06 | -0.11 | -0.74 | -0.74 |
Bra005193 (UMAMIT12) | 0.25 | 0.67 | 0.15 | -0.13 | -0.62 | -0.45 | -0.52 | -0.77 | -0.99 | -0.48 | -0.12 | -0.18 | 0.36 | -1.51 | -1.21 | -0.63 | -0.67 | -1.51 | -0.31 | -0.06 | 0.08 | 0.25 | 0.55 | 0.99 | 1.07 | 0.73 | 0.74 | 0.0 | -0.51 | 0.48 | -0.29 |
Bra017186 (UMAMIT12) | -0.29 | -0.08 | -0.78 | 0.02 | -1.79 | -0.33 | -1.89 | -1.02 | -1.3 | -0.18 | -0.21 | -0.43 | 1.27 | -1.25 | -0.38 | -0.0 | -0.37 | -0.94 | 0.86 | 0.49 | 0.86 | 0.26 | 0.65 | 1.08 | 0.94 | -0.01 | 0.69 | -0.06 | -1.46 | -0.36 | -1.13 |
Bra031077 (BES1) | -1.71 | -0.62 | -1.93 | -0.98 | -1.64 | -0.92 | -0.73 | -0.97 | -0.03 | -0.27 | -1.55 | 0.22 | 0.77 | 0.58 | 0.5 | -0.64 | -0.21 | -0.15 | 0.71 | 0.27 | 0.8 | -0.72 | 0.93 | 0.74 | 1.18 | 0.7 | 0.72 | -0.78 | -0.23 | -0.51 | -0.97 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.