Heatmap: Cluster_776 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021194 (PPR4)
1.54 0.29 -0.57 0.42 -0.17 1.65 0.34 0.12 0.5 -0.38 0.16 -4.59 -1.62 -0.99 0.24 -0.44 -1.02 0.84 -2.68 - -1.31 -4.68 -0.17 0.21 0.45 -0.54 0.77 -0.73 -0.3 -0.2 0.48
Bra032699 (LOI1)
1.33 -0.83 -2.29 - -1.07 1.31 -0.21 -2.06 1.08 -0.47 -0.08 - -0.65 -0.71 1.29 -1.8 1.46 1.42 - -1.87 0.27 - 0.89 -1.98 - - 1.23 -0.43 -1.01 -0.0 1.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.