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Heatmap: Cluster_323 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.53 -0.53 0.77 -0.29 1.15 -0.29 -1.09 -1.6 0.47 -1.06 -0.26 -0.95 -0.57 -0.55 0.14 -1.4 -0.02 -0.79 -1.48 -0.39 -1.89 -0.5 -0.01 0.65 0.41 0.5 0.46 0.71 0.72 0.41 0.58
Bra026271 (RMA2)
 -0.2 0.22 0.02 -0.33 -3.9 -0.74 -1.04 -6.79 0.26 1.35 0.56 -4.32 -1.72 -7.32 0.49 -4.52 0.62 -1.25 -0.92 -6.77 -1.11 -0.54 -0.28 0.57 0.63 1.52 0.75 0.44 1.17 0.69 0.75
0.58 -0.14 0.48 -0.34 1.25 0.01 -0.76 -1.32 0.08 -0.27 -0.54 -1.55 -0.38 -0.64 0.56 -1.55 0.05 -0.65 -1.3 -0.36 -0.93 -0.17 0.03 0.38 0.29 0.15 0.27 0.51 0.69 0.34 0.54
Bra031461 (VPS60.1)
 0.32 -1.23 0.03 -0.63 0.92 -0.92 -2.19 -1.88 0.4 -0.21 0.03 -1.86 -0.32 -6.7 0.74 -5.83 0.27 -1.74 -0.72 -0.29 -2.2 -0.74 0.15 0.84 0.74 0.67 0.73 0.89 0.99 0.73 0.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.