Heatmap: Cluster_802 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra035660 (ATL84)
- 0.95 - - -0.25 -0.32 -0.15 - -0.14 -1.32 -0.53 0.14 0.57 1.49 0.48 -0.43 -0.14 1.95 0.04 0.77 -0.74 0.56 0.36 0.58 - - -0.73 0.42 0.74 -2.38 -0.25
Bra036916 (AO1)
-0.91 -0.3 -3.44 -2.07 0.94 -1.75 -2.47 -2.06 -0.65 -1.3 0.58 0.21 0.15 1.42 0.11 -1.1 -0.18 1.36 -0.2 -0.92 -0.46 -0.59 0.98 -0.34 -2.15 -0.49 1.14 1.07 0.23 0.28 0.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.