Heatmap: Cluster_699 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra003420 (CYCP3;2)
- - - - - - -0.09 -0.52 - 1.03 -1.71 -2.86 0.06 - -1.46 1.28 -1.63 2.23 -1.35 -0.1 0.1 -1.26 2.57 1.31 1.21 0.83 -0.38 -0.99 -1.07 -1.7 -0.6
Bra037637 (WRKY12)
- - - - -1.55 - - - - -0.1 0.29 0.68 -1.42 -1.35 0.2 0.11 -0.62 2.83 -0.76 -1.6 - - 2.58 1.66 0.79 0.76 0.0 - 0.03 - -0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.