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Heatmap: Cluster_838 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001388 (RLP53)
 0.19 0.41 0.73 -0.42 1.51 1.33 -0.9 -2.12 0.31 0.25 -0.97 0.21 -0.76 0.06 0.59 0.5 -1.74 -1.55 0.58 0.27 -0.47 0.67 -0.63 -0.25 -0.54 -2.16 -0.61 -0.63 -0.1 -0.16 -2.56
Bra010816 (RKFL1)
 0.06 0.68 0.98 -0.61 1.36 1.67 -1.08 -1.22 0.68 -0.26 0.31 -0.05 -1.19 0.41 0.44 -0.41 -0.24 -0.43 0.3 0.7 -0.08 0.29 0.17 -1.66 -1.86 -2.06 -1.55 -1.26 -1.07 -0.72 -2.85
Bra035507 (HSFA1D)
 -0.3 0.23 1.03 -0.22 1.26 1.51 -0.31 -1.0 -0.89 0.0 -0.27 -1.3 -0.7 0.04 1.04 0.88 0.04 -0.02 -0.33 0.46 -0.67 -0.75 -0.14 -0.23 -0.83 -2.58 -0.46 -0.69 -0.23 -1.34 -0.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.