Heatmap: Cluster_685 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013069 (PUP1)
-0.51 -0.59 -0.84 -0.51 0.15 0.38 -0.25 -0.29 -0.22 -0.56 -0.39 -0.2 1.04 -0.57 -0.64 0.27 0.14 -0.29 -0.13 -0.48 -0.21 -0.31 1.48 0.25 0.16 -0.16 0.05 0.04 -0.25 -0.05 0.56
Bra037459 (ICK6)
-1.48 -0.53 -1.9 -1.72 0.1 -0.12 -1.38 -1.15 -0.61 -1.87 -1.17 -0.6 1.88 -1.23 0.39 -0.99 0.03 0.32 0.0 -0.67 -0.44 -0.79 2.5 -1.28 -0.0 0.35 0.07 0.18 -0.85 -0.72 0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.